Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842213.1_cds_XP_016508297.1_21334
CDS Infomation

[gene=LOC107825892] [db_xref=GeneID:107825892] [protein=ankyrin repeat-containing protein At3g12360-like] [protein_id=XP_016508297.1] [location=complement(join(139884..140711,141032..141441,142001..142571))] [gbkey=CDS]
Sequence

ATGGATTTGGAAATGGGGCTAACTTCGGCCCCAAATCCAATTTCTAACATGAATTATACC
GGCGAGCCATCACCGTCGCCATCGCCACGTGCACCAGCACTCGTGGTGTCACATTCAAGC
AAGTCTCTGATACCATCAAATTCAGGGAAGGCATTGGTTGTGTCAAATTCAGGGAAAGCA
TTACTTTTATCAAATTCAGGGAAAAGGATAGATCCTTCAGGTAAAAAAAAGTATGTGAAG
CAGGTGACGGGGCGACACAACGACACGGAGCTACACCTCGCGGCTCAGCGCGGGGACGTG
GGGGCGGTGAGGGAGATATTGGAGGAAATTGATGCACAGATGTTGAAAACAATGAGCGGA
GCAGAGTTTGATGCAGAGGTGGCGGCGATAAGGGAGGCAATGGTGAATGAGGTAAATGAA
TTAGGGGAAACGGCATTGTTCACTGCTGCTGAACGGGGATATATTGACGTGGTTAAGGAG
TTGCTTCCTTATAGTACAAAGGAGGGGATCACGACCAAGAATCGTTCTGGTTTTGATCCC
TTGCATATTGCTGCTAGCCAAGGCCACCAAGCTATTGTTAAGTTACTATTGGAGCATGAG
CCAGAGTTGAGCAAGACAGTTGGCCAATCAAATGCAACTCCTCTTGTATCTGCAGCCACA
AAAGGGCATATATCGGTTGTCAATGAATTGCTTTCCAAGGATTCTAGCTTGCTAGAGATA
CCAAGATCCAATGGCAAAAACGCGTTACATTTGTCTGCCCGCCAAGGCCATGTGAACATT
GTTAAAGCATTGCTGGAAAAGGATCCGCAACTGGCAAGAAGAACCGATAAAAAAGGACAG
ACTGCTTTACACATGGCTGTAAAAGGTGTTAGCAGTGAAGTAGTGAAGTTGCTTCTGCAA
GCAGATCCAGCCATTGTAATGCTGCCTGATAAGTTTGGCAACACTGCATTGCATATTGCC
ACACGGAAAAAGCGTTCAGAGATAGTGCACGAGCTTTTGCTGCTCGACGACACAAATGTC
AATGCACTGACAAGAGATCATAAAACAGCTCTAGACATAGCCGAAGGGCTTCCTATGTCT
GAAGAATCGACAGAACTAAAAGAGTGCTTGACTCGTTATGGTGCTTCGAGAGCCAACGAA
TTGAATCAGCCTCGCGATGAACTTAGAAAGACTGTGACAGAAATTAAGAAAAATGTACAC
TCCCAGCTTGAACAAGCGCGAAAGACTAACAAAAACATGACAGGTATTGCAAAGGAACTT
CAGAAGCTGCACAGGGAAGGAATTAACAATGCTACCAATTCTGTAACTATTGTAGCTTCT
CTTTTTGCAACAGTAGCTTTTGCTGCTATATTCACAGTTCCTGGTGGTGACCTTGACTCT
GGGTACGCTGTGGCGTCTAACACCCCATCATTTAAGATCTTCTATATCACAAATGCTCTT
GCACTCTTCACATCGTTGGCTGTTGTGGTTGTACAAATCACAGTAGTCAGGGGTGAGACA
AAATCTGATATAAGGGTTATTGGGGTGATTAACAAGTTAATGTGGTTGGCCGCGGTTTTC
ACTACTCTGGCTTTTGTATCTGCCTCTTATGTAGTTATTGGCCGGCGTAATATATGGGCT
GCAATTCTTGTTACAGTTTTTGCAGGAATTATCATGGCAGGGGTTTTAGGCGCCATGACT
TATTTTGTTGTGAAGTCTAAAAGGACTAGCAAAAACAGGAAGAGGGATAAGTTTGCAAGG
ACTAGAACCAACTCATGGCATCACTCGGAATTATCCGATTCAGAAATTAATCCAATGTTT
GCACTCTGA

Peptide Sequence

PEP ID

XP_016508297.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At3g12360-like [Nicotiana tabacum]
Sequence

MDLEMGLTSAPNPISNMNYTGEPSPSPSPRAPALVVSHSSKSLIPSNSGKALVVSNSGKA
LLLSNSGKRIDPSGKKKYVKQVTGRHNDTELHLAAQRGDVGAVREILEEIDAQMLKTMSG
AEFDAEVAAIREAMVNEVNELGETALFTAAERGYIDVVKELLPYSTKEGITTKNRSGFDP
LHIAASQGHQAIVKLLLEHEPELSKTVGQSNATPLVSAATKGHISVVNELLSKDSSLLEI
PRSNGKNALHLSARQGHVNIVKALLEKDPQLARRTDKKGQTALHMAVKGVSSEVVKLLLQ
ADPAIVMLPDKFGNTALHIATRKKRSEIVHELLLLDDTNVNALTRDHKTALDIAEGLPMS
EESTELKECLTRYGASRANELNQPRDELRKTVTEIKKNVHSQLEQARKTNKNMTGIAKEL
QKLHREGINNATNSVTIVASLFATVAFAAIFTVPGGDLDSGYAVASNTPSFKIFYITNAL
ALFTSLAVVVVQITVVRGETKSDIRVIGVINKLMWLAAVFTTLAFVSASYVVIGRRNIWA
AILVTVFAGIIMAGVLGAMTYFVVKSKRTSKNRKRDKFARTRTNSWHHSELSDSEINPMF
AL

Transcript Sequence

Gene sequence data has not been registered.